ECOD: domain e1pkyD3

Domain ID e1pkyD3

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: PK

UID:	001517902
Type:	Automatic domain
Parent:	e2g50A2
Range:	D:1-70,D:169-344
PDB:	1pky
PDB Description:	PYRUVATE KINASE
UniProt:	P0AD61
Hsap BLAST neighbor:	P14618
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e1pkyD3

Domains in the same chain:

Download Pymol

e1pkyD3	D:1-70,D:169-344	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1pkyD4	D:70-168	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e1pkyD1	D:345-470	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Domains in the same PDB:

e1pkyA3	A:1-70,A:169-344	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1pkyA4	A:70-168	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e1pkyA1	A:345-470	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e1pkyB3	B:1-70,B:169-344	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1pkyB4	B:70-168	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e1pkyB1	B:345-470	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e1pkyC2	C:1-70,C:169-345	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1pkyC1	C:105-168	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e1pkyC3	C:346-470	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like
e1pkyD3	D:1-70,D:169-344	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e1pkyD4	D:70-168	cradle loop barrel	RIFT-related	PK beta-barrel domain-like
e1pkyD1	D:345-470	PK C-terminal domain-like	PK C-terminal domain-like	PK C-terminal domain-like

Structural contacts of domain e1pkyD3 of H-group "TIM barrels":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1pkyB3	D:x,y,z->B:X,Y,Z	TIM barrels	Interaction Interface Pymol
e1pkyC1	D:X-1/2,-Y-1/2,-Z+1->C:x,y,z	RIFT-related	Interaction Interface Pymol
e1pkyC2	D:X-1/2,-Y-1/2,-Z+1->C:x,y,z	TIM barrels	Interaction Interface Pymol
e1pkyB4	D:X-1,Y,Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1pkyA4	D:-X+1/2,-Y,Z-1/2->A:x,y,z	RIFT-related	Interaction Interface Pymol