Domain ID e1pnsH2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 000440630
Type: Automatic domain
Parent: e1seiA2
Range: H:67-138
PDB: 1pns
PDB Description:
Species:

Structure of domain e1pnsH2

Domains in the same chain:

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e1pnsH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1pnsH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e1pnsC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e1pnsC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e1pnsE4 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1pnsE3 E:73-154 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1pnsF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e1pnsG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e1pnsH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1pnsH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e1pnsJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e1pnsK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1pnsL1 L:5-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1pnsN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e1pnsO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e1pnsP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e1pnsR1 R:16-88 HTH HTH tri-helical
e1pnsT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e1pnsH2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pnsE3 H:x,y,z->E:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e1pnsL1 H:X,Y,Z->L:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol