Domain ID e1pnxJ1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal protein S10
  • T: Ribosomal protein S10
  • F: Ribosomal_S10
UID: 000440686
Type: Automatic domain
Parent: e2uubJ1
Range: J:3-100
PDB: 1pnx
PDB Description:
Hsap BLAST neighbor: P60866
Species:

Structure of domain e1pnxJ1

Domains in the same chain:

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e1pnxJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10

Domains in the same PDB:

e1pnxC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e1pnxC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e1pnxE4 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1pnxE3 E:73-154 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1pnxF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e1pnxG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e1pnxH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1pnxH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e1pnxJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e1pnxK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1pnxL1 L:5-128 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1pnxN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e1pnxO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e1pnxP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e1pnxR1 R:16-88 HTH HTH tri-helical
e1pnxT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e1pnxJ1 of H-group "Ribosomal protein S10":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1pnxN1 J:X,Y,Z->N:x,y,z LIM domain-like Interaction Interface Pymol
e1pnxC2 J:x,y,z->C:X,Y,Z KH-domains Interaction Interface Pymol
e1pnxG1 J:x,y,z->G:-Y,X,Z Ribosomal protein S7 Interaction Interface Pymol