| UID: | 000066587 |
|---|---|
| Type: | Automatic domain |
| Parent: | e1k8wA2 |
| Range: | A:9-123,A:153-250 |
| PDB: | 1r3f |
| PDB Description: | tRNA pseudouridine synthase B |
| UniProt: | P60340 |
| Hsap BLAST neighbor: | Q8WWH5 |
| Species: | Escherichia coli |
Structure of domain e1r3fA2
Domains in the same chain:
| e1r3fA2 | A:9-123,A:153-250 | Alpha-beta plaits | Pseudouridine synthase | Pseudouridine synthase |
| e1r3fA1 | A:251-312 | cradle loop barrel | RIFT-related | PUA domain |
Domains in the same PDB:
| e1r3fA2 | A:9-123,A:153-250 | Alpha-beta plaits | Pseudouridine synthase | Pseudouridine synthase |
| e1r3fA1 | A:251-312 | cradle loop barrel | RIFT-related | PUA domain |
Structural contacts of domain e1r3fA2 of H-group "Pseudouridine synthase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1r3fA2 | A:x,y,z->A:-X+3,Y-1/2,-Z+2 | Pseudouridine synthase | Interaction Interface Pymol |
| e1r3fA1 | A:x,y,z->A:-X+3,Y-1/2,-Z+2 | RIFT-related | Interaction Interface Pymol |
| e1r3fA2 | A:-X+3,Y-1/2,-Z+2->A:x,y,z | Pseudouridine synthase | Interaction Interface Pymol |
| e1r3fA2 | A:x,y,z->A:-X+2,Y-1/2,-Z+2 | Pseudouridine synthase | Interaction Interface Pymol |
| e1r3fA1 | A:x,y,z->A:-X+2,Y-1/2,-Z+2 | RIFT-related | Interaction Interface Pymol |
| e1r3fA2 | A:-X+2,Y-1/2,-Z+2->A:x,y,z | Pseudouridine synthase | Interaction Interface Pymol |
| e1r3fA1 | A:x,y,z->A:-X+2,Y-1/2,-Z+1 | RIFT-related | Interaction Interface Pymol |
| e1r3fA1 | A:x,y,z->A:X,Y-1,Z | RIFT-related | Interaction Interface Pymol |
| e1r3fA2 | A:x,y,z->A:X,Y,Z-1 | Pseudouridine synthase | Interaction Interface Pymol |
| e1r3fA2 | A:X,Y,Z-1->A:x,y,z | Pseudouridine synthase | Interaction Interface Pymol |
