Domain ID e1rmdA1

Download files:
  • A: few secondary structure elements
  • X: RING/U-box-like
  • H: RING/U-box-like
  • T: RING/U-box
  • F: zf-C3HC4,RAG1_imp_bd
UID: 000008087
Type: Manual and representative domain
Range: A:1-86
Ligands: ZN
PDB: 1rmd
PDB Description: RAG1
UniProt: P15919
Hsap BLAST neighbor: P15918
Species: Mus musculus

Structure of domain e1rmdA1

Structural contacts of domain e1rmdA1 of H-group "RING/U-box-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1rmdA1 A:x,y,z->A:-X,-X+Y,-Z+2/3 RING/U-box-like Interaction Interface Pymol
e1rmdA1 A:-X,-X+Y,-Z+2/3->A:x,y,z RING/U-box-like Interaction Interface Pymol
e1rmdA1 A:x,y,z->A:-Y+1,X-Y+1,Z-1/3 RING/U-box-like Interaction Interface Pymol
e1rmdA2 A:x,y,z->A:-Y+1,X-Y+1,Z-1/3 beta-beta-alpha zinc fingers Interaction Interface Pymol
e1rmdA1 A:-Y+1,X-Y+1,Z-1/3->A:x,y,z RING/U-box-like Interaction Interface Pymol
e1rmdA2 A:x,y,z->A:Y-1,X,-Z+1 beta-beta-alpha zinc fingers Interaction Interface Pymol