| UID: | 000008315 |
|---|---|
| Type: | Manual and representative domain |
| Range: | A:87-116 |
| Ligands: | ZN |
| PDB: | 1rmd |
| PDB Description: | RAG1 |
| UniProt: | P15919 |
| Hsap BLAST neighbor: | P15918 |
| Species: | Mus musculus |
Structure of domain e1rmdA2
Domains in the same chain:
| e1rmdA1 | A:1-86 | RING/U-box-like | RING/U-box-like | RING/U-box |
| e1rmdA2 | A:87-116 | beta-beta-alpha zinc fingers | beta-beta-alpha zinc fingers | beta-beta-alpha zinc fingers |
Domains in the same PDB:
| e1rmdA1 | A:1-86 | RING/U-box-like | RING/U-box-like | RING/U-box |
| e1rmdA2 | A:87-116 | beta-beta-alpha zinc fingers | beta-beta-alpha zinc fingers | beta-beta-alpha zinc fingers |
Structural contacts of domain e1rmdA2 of H-group "beta-beta-alpha zinc fingers":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1rmdA1 | A:-Y+1,X-Y+1,Z-1/3->A:x,y,z | RING/U-box-like | Interaction Interface Pymol |
| e1rmdA2 | A:x,y,z->A:X-Y+1,-Y+2,-Z+4/3 | beta-beta-alpha zinc fingers | Interaction Interface Pymol |
| e1rmdA2 | A:X-Y+1,-Y+2,-Z+4/3->A:x,y,z | beta-beta-alpha zinc fingers | Interaction Interface Pymol |
| e1rmdA1 | A:Y-1,X,-Z+1->A:x,y,z | RING/U-box-like | Interaction Interface Pymol |
