Domain ID e1s1iD1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L4
  • H: Ribosomal protein L4
  • T: Ribosomal protein L4
  • F: Ribosomal_L4
UID: 000266134
Type: Automatic domain
Parent: e1dmgA1
Range: D:4-259
PDB: 1s1i
PDB Description:
Hsap BLAST neighbor: P36578
Species:

Structure of domain e1s1iD1

Domains in the same chain:

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e1s1iD1 D:4-259 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4

Domains in the same PDB:

e1s1i01 0:27-122 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e1s1i91 9:9-81 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1s1iA1 A:4-56,A:153-216 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e1s1iA2 A:57-152 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e1s1iC1 C:7-365 cradle loop barrel RIFT-related Alanine racemase-C
e1s1iD1 D:4-259 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e1s1iE1 E:11-232 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1s1iF1 F:82-242 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e1s1iG1 G:101-219 Bacillus chorismate mutase-like L30e-like L30e-like
e1s1iH1 H:7-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1s1iH3 H:86-184 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1s1iI1 I:4-168 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e1s1iJ1 J:6-170 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e1s1iK2 K:13-73 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e1s1iK1 K:74-143 HTH HTH Ribosomal protein L11, C-terminal domain
e1s1iL1 L:2-195 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e1s1iM1 M:1-146 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e1s1iN1 N:5-151 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e1s1iO1 O:22-141 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e1s1iP2 P:2-55 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e1s1iP3 P:56-142 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e1s1iQ1 Q:7-100 SH3 SH3 SH3
e1s1iR1 R:7-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e1s1iS2 S:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e1s1iT1 T:59-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e1s1iU1 U:9-123 SH3 SH3 SH3
e1s1iW1 W:5-82 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e1s1iX1 X:2-60 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e1s1iY1 Y:1-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1s1iZ1 Z:1-91 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Structural contacts of domain e1s1iD1 of H-group "Ribosomal protein L4":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1s1iO1 D:x,y,z->O:X,Y,Z Ribosomal proteins L15p and L18e Interaction Interface Pymol
e1s1iY1 D:x,y,z->Y:X,Y,Z Rubredoxin-related Interaction Interface Pymol