ECOD: domain e1skqA3

Domain ID e1skqA3

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: GTP_EFTU

UID:	000101578
Type:	Automatic domain
Parent:	e2c78A3
Range:	A:4-227
Ligands:	GDP MG
PDB:	1skq
PDB Description:	Elongation factor 1-alpha
UniProt:	P35021
Hsap BLAST neighbor:	P68104
Species:	Sulfolobus solfataricus

Domain
In chain context
In PDB context

Structure of domain e1skqA3

Domains in the same chain:

Download Pymol

e1skqA3	A:4-227	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1skqA1	A:228-322	cradle loop barrel	RIFT-related	Alanine racemase-C
e1skqA2	A:323-429	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

Structural contacts of domain e1skqA3 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1skqB1	A:-X,Y-1/2,-Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1skqB2	A:-X+1,Y-1/2,-Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1skqB1	A:-X+1,Y-1/2,-Z->B:x,y,z	RIFT-related	Interaction Interface Pymol
e1skqB3	A:X,Y-1,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e1skqA2	A:-X+1,Y-1/2,-Z->A:x,y,z	RIFT-related	Interaction Interface Pymol
e1skqA1	A:X-1,Y,Z->A:x,y,z	RIFT-related	Interaction Interface Pymol