ECOD: domain e1skqB1

Domain ID e1skqB1

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: GTP_EFTU_D2

UID:	000021625
Type:	Automatic domain
Parent:	e2c78A1
Range:	B:228-322
PDB:	1skq
PDB Description:	Elongation factor 1-alpha
UniProt:	P35021
Hsap BLAST neighbor:	P68104
Species:	Sulfolobus solfataricus

Domain
In chain context
In PDB context

Structure of domain e1skqB1

Domains in the same chain:

Download Pymol

e1skqB3	B:4-227	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1skqB1	B:228-322	cradle loop barrel	RIFT-related	Alanine racemase-C
e1skqB2	B:323-429	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

Structural contacts of domain e1skqB1 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1skqA3	B:x,y,z->A:-X,Y-1/2,-Z	P-loop domains-related	Interaction Interface Pymol
e1skqA2	B:x,y,z->A:-X,Y-1/2,-Z	RIFT-related	Interaction Interface Pymol
e1skqA3	B:x,y,z->A:-X+1,Y-1/2,-Z	P-loop domains-related	Interaction Interface Pymol

e1skqA3	A:4-227	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1skqA1	A:228-322	cradle loop barrel	RIFT-related	Alanine racemase-C
e1skqA2	A:323-429	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e1skqB3	B:4-227	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1skqB1	B:228-322	cradle loop barrel	RIFT-related	Alanine racemase-C
e1skqB2	B:323-429	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain