Domain ID e1sqxB2

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  • A: a+b two layers
  • X: LuxS, MPP, ThrRS/AlaRS common domain
  • H: LuxS, MPP, ThrRS/AlaRS common domain
  • T: LuxS/MPP-like metallohydrolase
  • F: Peptidase_M16_C
UID: 000067308
Type: Automatic domain
Parent: e1hr6A2
Range: B:236-439
PDB: 1sqx
PDB Description: Ubiquinol-cytochrome-c reductase complex core protein 2, mitochondrial precursor
UniProt: P23004
Hsap BLAST neighbor: P22695
Species: Bos taurus

Structure of domain e1sqxB2

Domains in the same chain:

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e1sqxB1 B:18-235 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1sqxB2 B:236-439 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase

Domains in the same PDB:

e1sqxA1 A:2-233 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1sqxA2 A:234-442 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1sqxB1 B:18-235 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1sqxB2 B:236-439 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e1sqxC2 C:15-260 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e1sqxC1 C:261-379 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1sqxD1 D:1-195 Cytochrome c-like Cytochrome c Cytochrome c
e1sqxD2 D:196-241 cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor
e1sqxE2 E:1-69 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e1sqxE3 E:70-196 ISP domain ISP domain ISP domain
e1sqxF1 F:12-110 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1sqxG1 G:1-75 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1sqxH1 H:13-78 cytochrome bc1 complex 11 kDa protein-like Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1sqxI1 I:1-57 Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein
e1sqxJ1 J:2-61 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1sqxK1 K:1-53 Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)

Structural contacts of domain e1sqxB2 of H-group "LuxS, MPP, ThrRS/AlaRS common domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1sqxA2 B:x,y,z->A:X,Y,Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1sqxA1 B:x,y,z->A:X,Y,Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1sqxI1 B:X,Y,Z->I:x,y,z Ubiquinol-cytochrome c reductase 8 kDa protein Interaction Interface Pymol
e1sqxB2 B:x,y,z->B:-X+1,-Y+1,Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1sqxB1 B:x,y,z->B:-X+1,-Y+1,Z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1sqxB1 B:-X+1,-Y+1,Z->B:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1sqxB2 B:-X+1,-Y+1,Z->B:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1sqxB2 B:x,y,z->B:X,-Y+3/2,-Z+1/4 LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1sqxB1 B:x,y,z->B:X,-Y+3/2,-Z+1/4 LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1sqxB1 B:X,-Y+3/2,-Z+1/4->B:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1sqxB2 B:X,-Y+3/2,-Z+1/4->B:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol
e1sqxB2 B:-Y+1,X+1/2,Z+1/4->E:x,y,z LuxS, MPP, ThrRS/AlaRS common domain Interaction Interface Pymol