ECOD: domain e1sxjF2

Domain ID e1sxjF2

A: a+b two layers
X: DNA clamp
H: DNA clamp
T: DNA clamp
F: PCNA_C

UID:	000071040
Type:	Automatic domain
Parent:	e1plqA2
Range:	F:127-256
PDB:	1sxj
PDB Description:	Proliferating cell nuclear antigen
UniProt:	P15873
Hsap BLAST neighbor:	P12004
Species:	Saccharomyces cerevisiae

Domains in the same chain:

Download Pymol

e1sxjF1	F:1-126	DNA clamp	DNA clamp	DNA clamp
e1sxjF2	F:127-256	DNA clamp	DNA clamp	DNA clamp

Domains in the same PDB:

e1sxjA3	A:295-478	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1sxjA2	A:479-547	Histone-like	Histone-related	AAA+ ATPase lid domain
e1sxjA1	A:548-693	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e1sxjB3	B:7-165	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1sxjB2	B:166-229	Histone-like	Histone-related	AAA+ ATPase lid domain
e1sxjB1	B:231-322	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e1sxjC5	C:12-167	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1sxjC6	C:168-232	Histone-like	Histone-related	AAA+ ATPase lid domain
e1sxjC1	C:239-333	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e1sxjD4	D:26-192	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1sxjD5	D:193-261	Histone-like	Histone-related	AAA+ ATPase lid domain
e1sxjD1	D:263-353	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e1sxjE6	E:4-192	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1sxjE5	E:193-255	Histone-like	Histone-related	AAA+ ATPase lid domain
e1sxjE1	E:256-354	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain	DNA polymerase III clamp loader subunits, C-terminal domain
e1sxjF1	F:1-126	DNA clamp	DNA clamp	DNA clamp
e1sxjF2	F:127-256	DNA clamp	DNA clamp	DNA clamp
e1sxjG1	G:1-126	DNA clamp	DNA clamp	DNA clamp
e1sxjG2	G:127-255	DNA clamp	DNA clamp	DNA clamp
e1sxjH1	H:1-126	DNA clamp	DNA clamp	DNA clamp
e1sxjH2	H:127-254	DNA clamp	DNA clamp	DNA clamp

Structural contacts of domain e1sxjF2 of H-group "DNA clamp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1sxjC5	F:x,y,z->C:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e1sxjG1	F:X,Y,Z->G:x,y,z	DNA clamp	Interaction Interface Pymol
e1sxjE1	F:X,Y-1,Z->E:x,y,z	DNA polymerase III clamp loader subunits, C-terminal domain	Interaction Interface Pymol
e1sxjE5	F:X,Y-1,Z->E:x,y,z	Histone-related	Interaction Interface Pymol
e1sxjB3	F:x,y,z->B:X,Y,Z	P-loop domains-related	Interaction Interface Pymol
e1sxjB3	F:-X,Y-1/2,-Z+1/2->B:x,y,z	P-loop domains-related	Interaction Interface Pymol
e1sxjA2	F:-X,Y-1/2,-Z+1/2->A:x,y,z	Histone-related	Interaction Interface Pymol