Domain ID e1syqA1

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  • A: alpha bundles
  • X: Four-helical up-and-down bundle
  • H: alpha-catenin-related
  • T: alpha-catenin/vinculin
  • F: Vinculin
UID: 000054389
Type: Automatic domain
Parent: e1dovA1
Range: A:1-125
PDB: 1syq
PDB Description: vinculin isoform VCL
UniProt: P18206
Hsap BLAST neighbor: P18206
Species: Homo sapiens

Structure of domain e1syqA1

Structural contacts of domain e1syqA1 of H-group "alpha-catenin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1syqA1 A:x,y,z->A:Y+2/3,X-2/3,-Z+1/3 alpha-catenin-related Interaction Interface Pymol
e1syqA2 A:x,y,z->A:Y+2/3,X-2/3,-Z+1/3 alpha-catenin-related Interaction Interface Pymol
e1syqA2 A:Y+2/3,X-2/3,-Z+1/3->A:x,y,z alpha-catenin-related Interaction Interface Pymol
e1syqA1 A:Y+2/3,X-2/3,-Z+1/3->A:x,y,z alpha-catenin-related Interaction Interface Pymol
e1syqA1 A:x,y,z->A:-Y+1,X-Y,Z alpha-catenin-related Interaction Interface Pymol
e1syqA2 A:-Y+1,X-Y,Z->A:x,y,z alpha-catenin-related Interaction Interface Pymol
e1syqA1 A:-Y+1,X-Y,Z->A:x,y,z alpha-catenin-related Interaction Interface Pymol
e1syqA1 A:x,y,z->A:X-Y+1/3,-Y+2/3,-Z+2/3 alpha-catenin-related Interaction Interface Pymol
e1syqA1 A:X-Y+1/3,-Y+2/3,-Z+2/3->A:x,y,z alpha-catenin-related Interaction Interface Pymol
e1syqA2 A:x,y,z->A:-X+5/3,-X+Y+1/3,-Z+1/3 alpha-catenin-related Interaction Interface Pymol