ECOD: domain e1syqA1

Domain ID e1syqA1

A: alpha bundles
X: Four-helical up-and-down bundle
H: alpha-catenin-related
T: alpha-catenin/vinculin
F: Vinculin

UID:	000054389
Type:	Automatic domain
Parent:	e1dovA1
Range:	A:1-125
PDB:	1syq
PDB Description:	vinculin isoform VCL
UniProt:	P18206
Hsap BLAST neighbor:	P18206
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e1syqA1	A:1-125	Four-helical up-and-down bundle	alpha-catenin-related	alpha-catenin/vinculin
e1syqA2	A:129-252	Four-helical up-and-down bundle	alpha-catenin-related	alpha-catenin/vinculin

Domains in the same PDB:

e1syqA1	A:1-125	Four-helical up-and-down bundle	alpha-catenin-related	alpha-catenin/vinculin
e1syqA2	A:129-252	Four-helical up-and-down bundle	alpha-catenin-related	alpha-catenin/vinculin

Structural contacts of domain e1syqA1 of H-group "alpha-catenin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1syqA1	A:x,y,z->A:Y+2/3,X-2/3,-Z+1/3	alpha-catenin-related	Interaction Interface Pymol
e1syqA2	A:x,y,z->A:Y+2/3,X-2/3,-Z+1/3	alpha-catenin-related	Interaction Interface Pymol
e1syqA2	A:Y+2/3,X-2/3,-Z+1/3->A:x,y,z	alpha-catenin-related	Interaction Interface Pymol
e1syqA1	A:Y+2/3,X-2/3,-Z+1/3->A:x,y,z	alpha-catenin-related	Interaction Interface Pymol
e1syqA1	A:x,y,z->A:-Y+1,X-Y,Z	alpha-catenin-related	Interaction Interface Pymol
e1syqA2	A:-Y+1,X-Y,Z->A:x,y,z	alpha-catenin-related	Interaction Interface Pymol
e1syqA1	A:-Y+1,X-Y,Z->A:x,y,z	alpha-catenin-related	Interaction Interface Pymol
e1syqA1	A:x,y,z->A:X-Y+1/3,-Y+2/3,-Z+2/3	alpha-catenin-related	Interaction Interface Pymol
e1syqA1	A:X-Y+1/3,-Y+2/3,-Z+2/3->A:x,y,z	alpha-catenin-related	Interaction Interface Pymol
e1syqA2	A:x,y,z->A:-X+5/3,-X+Y+1/3,-Z+1/3	alpha-catenin-related	Interaction Interface Pymol