Domain ID e1syqA2

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  • A: alpha bundles
  • X: Four-helical up-and-down bundle
  • H: alpha-catenin-related
  • T: alpha-catenin/vinculin
  • F: Vinculin
UID: 000054395
Type: Automatic domain
Parent: e1dovA1
Range: A:129-252
PDB: 1syq
PDB Description: vinculin isoform VCL
UniProt: P18206
Hsap BLAST neighbor: P18206
Species: Homo sapiens

Structure of domain e1syqA2

Structural contacts of domain e1syqA2 of H-group "alpha-catenin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1syqA1 A:x,y,z->A:Y+2/3,X-2/3,-Z+1/3 alpha-catenin-related Interaction Interface Pymol
e1syqA1 A:Y+2/3,X-2/3,-Z+1/3->A:x,y,z alpha-catenin-related Interaction Interface Pymol
e1syqA1 A:x,y,z->A:-Y+1,X-Y,Z alpha-catenin-related Interaction Interface Pymol
e1syqA2 A:x,y,z->A:-Y+1,X-Y,Z alpha-catenin-related Interaction Interface Pymol
e1syqA2 A:-Y+1,X-Y,Z->A:x,y,z alpha-catenin-related Interaction Interface Pymol
e1syqA2 A:x,y,z->A:-X+4/3,-X+Y+2/3,-Z-1/3 alpha-catenin-related Interaction Interface Pymol
e1syqA2 A:-X+4/3,-X+Y+2/3,-Z-1/3->A:x,y,z alpha-catenin-related Interaction Interface Pymol
e1syqA2 A:x,y,z->A:Y+1/3,X-1/3,-Z-1/3 alpha-catenin-related Interaction Interface Pymol
e1syqA2 A:Y+1/3,X-1/3,-Z-1/3->A:x,y,z alpha-catenin-related Interaction Interface Pymol
e1syqA1 A:-X+5/3,-X+Y+1/3,-Z+1/3->A:x,y,z alpha-catenin-related Interaction Interface Pymol