Domain ID e1taqA3

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  • A: alpha bundles
  • X: "fingers" domain in bacteriophage RB69-like DNA polymerase I
  • H: "fingers" domain in bacteriophage RB69-like DNA polymerase I
  • T: "fingers" domain in bacteriophage RB69-like DNA polymerase I
  • F: DNA_pol_A
UID: 000057684
Type: Automatic domain
Parent: e2hhvA2
Range: A:423-600
PDB: 1taq
PDB Description: TAQ DNA POLYMERASE
UniProt: P19821
Hsap BLAST neighbor: Q7Z5Q5
Species: Thermus aquaticus

Structure of domain e1taqA3

Domains in the same chain:

e1taqA5 A:10-173 HAD domain-like HAD domain-related PIN domain-like
e1taqA6 A:174-289 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1taqA11 A:291-422 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1taqA3 A:423-600 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e1taqA14 A:601-630,A:750-832 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1taqA13 A:626-749 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Domains in the same PDB:

e1taqA5 A:10-173 HAD domain-like HAD domain-related PIN domain-like
e1taqA6 A:174-289 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1taqA11 A:291-422 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1taqA3 A:423-600 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e1taqA14 A:601-630,A:750-832 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1taqA13 A:626-749 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Structural contacts of domain e1taqA3 of H-group ""fingers" domain in bacteriophage RB69-like DNA polymerase I":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1taqA3 A:x,y,z->A:-X,-X+Y,-Z+4/3 "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e1taqA3 A:-X,-X+Y,-Z+4/3->A:x,y,z "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e1taqA13 A:x,y,z->A:-Y+1,X-Y+1,Z+1/3 helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e1taqA14 A:x,y,z->A:-Y+1,X-Y+1,Z+1/3 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1taqA14 A:-Y+1,X-Y+1,Z+1/3->A:x,y,z Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1taqA11 A:x,y,z->A:Y,X,-Z+1 Ribonuclease H-like Interaction Interface Pymol
e1taqA11 A:Y,X,-Z+1->A:x,y,z Ribonuclease H-like Interaction Interface Pymol