Domain ID e1taqA11

Download files:
  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Taq-exonuc
UID: 001245609
Type: Automatic domain
Parent: e1qtmA4
Range: A:291-422
PDB: 1taq
PDB Description: TAQ DNA POLYMERASE
UniProt: P19821
Species: Thermus aquaticus

Structure of domain e1taqA11

Domains in the same chain:

Download Pymol

e1taqA5 A:10-173 HAD domain-like HAD domain-related PIN domain-like
e1taqA6 A:174-289 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1taqA11 A:291-422 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1taqA3 A:423-600 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e1taqA14 A:601-630,A:750-832 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1taqA13 A:626-749 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Domains in the same PDB:

e1taqA5 A:10-173 HAD domain-like HAD domain-related PIN domain-like
e1taqA6 A:174-289 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e1taqA11 A:291-422 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1taqA3 A:423-600 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e1taqA14 A:601-630,A:750-832 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1taqA13 A:626-749 helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Structural contacts of domain e1taqA11 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1qtmA4 A:x,y,z->A:-X,-X+Y,-Z+4/3 Ribonuclease H-like Interaction Interface Pymol
e1qtmA4 A:x,y,z->A:-X,-X+Y,-Z+4/3 Ribonuclease H-like Interaction Interface Pymol
e1qtmA4 A:-X,-X+Y,-Z+4/3->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e1qtmA4 A:-X,-X+Y,-Z+4/3->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e1taqA13 A:x,y,z->A:-Y+1,X-Y+1,Z+1/3 helical bundle in Bacillus stearothermophilus-like DNA polymerase I Interaction Interface Pymol
e1taqA11 A:x,y,z->A:Y,X,-Z+1 Ribonuclease H-like Interaction Interface Pymol
e1taqA3 A:x,y,z->A:Y,X,-Z+1 "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e1taqA11 A:Y,X,-Z+1->A:x,y,z Ribonuclease H-like Interaction Interface Pymol
e1taqA3 A:Y,X,-Z+1->A:x,y,z "fingers" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol