| UID: | 000007620 |
|---|---|
| Type: | Manual and representative domain |
| Range: | B:1098-1224 |
| Ligands: | ZN |
| PDB: | 1twf |
| PDB Description: | DNA-DIRECTED RNA POLYMERASE II 140 KDA POLYPEPTIDE |
| UniProt: | P08518 |
| Hsap BLAST neighbor: | P30876 |
| Species: | Saccharomyces cerevisiae |
Structure of domain e1twfB8
Domains in the same chain:
Domains in the same PDB:
Structural contacts of domain e1twfB8 of H-group "C-terminal domain in beta subunit of DNA dependent RNA-polymerase":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e1twfA1 | B:x,y,z->A:X,Y,Z | RIFT-related | Interaction Interface Pymol |
| e1twfA12 | B:x,y,z->A:X,Y,Z | central helical domain in RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
| e1twfA4 | B:x,y,z->A:X,Y,Z | N-terminal domain in RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
| e1twfA5 | B:x,y,z->A:X,Y,Z | MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | Interaction Interface Pymol |
| e1twfA10 | B:x,y,z->A:X,Y,Z | second helical domain in RNA-polymerase beta-prime subunit | Interaction Interface Pymol |
| e1twfF1 | B:X,Y,Z->F:x,y,z | RPB6/omega subunit-like | Interaction Interface Pymol |
| e1twfE2 | B:x,y,z->E:X-1/2,-Y+1/2,-Z+1/2 | Eukaryotic RPB5 N-terminal domain | Interaction Interface Pymol |
| e1twfE1 | B:X,Y,Z->E:x,y,z | RPB5-like RNA polymerase subunit | Interaction Interface Pymol |
