ECOD: domain e1ul1B1

Domain ID e1ul1B1

A: a+b two layers
X: DNA clamp
H: DNA clamp
T: DNA clamp
F: PCNA_N

UID:	000071047
Type:	Automatic domain
Parent:	e1plqA1
Range:	B:1-126
PDB:	1ul1
PDB Description:	PROLIFERATING CELL NUCLEAR ANTIGEN
UniProt:	P12004
Hsap BLAST neighbor:	P12004
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1ul1B1

Domains in the same chain:

Download Pymol

e1ul1B1	B:1-126	DNA clamp	DNA clamp	DNA clamp
e1ul1B2	B:127-255	DNA clamp	DNA clamp	DNA clamp

Domains in the same PDB:

e1ul1A1	A:1-126	DNA clamp	DNA clamp	DNA clamp
e1ul1A2	A:127-255	DNA clamp	DNA clamp	DNA clamp
e1ul1B1	B:1-126	DNA clamp	DNA clamp	DNA clamp
e1ul1B2	B:127-255	DNA clamp	DNA clamp	DNA clamp
e1ul1C1	C:1-126	DNA clamp	DNA clamp	DNA clamp
e1ul1C2	C:127-255	DNA clamp	DNA clamp	DNA clamp
e1ul1X2	X:2-99,X:129-217	HAD domain-like	HAD domain-related	PIN domain-like
e1ul1X1	X:218-357	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e1ul1Y2	Y:2-102,Y:134-217	HAD domain-like	HAD domain-related	PIN domain-like
e1ul1Y1	Y:218-357	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e1ul1Z2	Z:2-217	HAD domain-like	HAD domain-related	PIN domain-like
e1ul1Z1	Z:218-356	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Structural contacts of domain e1ul1B1 of H-group "DNA clamp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ul1Y1	B:x,y,z->Y:X,Y,Z	SAM/DNA-glycosylase	Interaction Interface Pymol
e1ul1Y2	B:x,y,z->Y:X,Y,Z	HAD domain-related	Interaction Interface Pymol
e1ul1Z2	B:X-1,Y,Z->Z:x,y,z	HAD domain-related	Interaction Interface Pymol
e1ul1C2	B:X,Y,Z->C:x,y,z	DNA clamp	Interaction Interface Pymol
e1ul1A1	B:-X+1,Y-1/2,-Z+1/2->A:x,y,z	DNA clamp	Interaction Interface Pymol