ECOD: domain e1ul1X2

Domain ID e1ul1X2

A: a/b three-layered sandwiches
X: HAD domain-like
H: HAD domain-related
T: PIN domain-like
F: XPG_N,XPG_I

UID:	000009945
Type:	Manual and representative domain
Range:	X:2-99,X:129-217
Ligands:	MG
PDB:	1ul1
PDB Description:	FLAP ENDONUCLEASE-1
UniProt:	P39748
Hsap BLAST neighbor:	P39748
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e1ul1X2

Domains in the same chain:

Download Pymol

e1ul1X2	X:2-99,X:129-217	HAD domain-like	HAD domain-related	PIN domain-like
e1ul1X1	X:218-357	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Domains in the same PDB:

e1ul1A1	A:1-126	DNA clamp	DNA clamp	DNA clamp
e1ul1A2	A:127-255	DNA clamp	DNA clamp	DNA clamp
e1ul1B1	B:1-126	DNA clamp	DNA clamp	DNA clamp
e1ul1B2	B:127-255	DNA clamp	DNA clamp	DNA clamp
e1ul1C1	C:1-126	DNA clamp	DNA clamp	DNA clamp
e1ul1C2	C:127-255	DNA clamp	DNA clamp	DNA clamp
e1ul1X2	X:2-99,X:129-217	HAD domain-like	HAD domain-related	PIN domain-like
e1ul1X1	X:218-357	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e1ul1Y2	Y:2-102,Y:134-217	HAD domain-like	HAD domain-related	PIN domain-like
e1ul1Y1	Y:218-357	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like
e1ul1Z2	Z:2-217	HAD domain-like	HAD domain-related	PIN domain-like
e1ul1Z1	Z:218-356	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like

Structural contacts of domain e1ul1X2 of H-group "HAD domain-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ul1A2	X:X,Y,Z->A:x,y,z	DNA clamp	Interaction Interface Pymol
e1ul1Y1	X:x,y,z->Y:-X,Y-1/2,-Z+1/2	SAM/DNA-glycosylase	Interaction Interface Pymol
e1ul1Y2	X:x,y,z->Y:-X,Y-1/2,-Z+1/2	HAD domain-related	Interaction Interface Pymol
e1ul1B2	X:x,y,z->B:-X+1,Y-1/2,-Z+1/2	DNA clamp	Interaction Interface Pymol