Domain ID e1upaA1

Download files:
  • A: a/b three-layered sandwiches
  • X: Rossmann-like
  • H: Rossmann-related
  • T: DHS-like NAD/FAD-binding domain
  • F: TPP_enzyme_M
UID: 000099304
Type: Automatic domain
Parent: e2ez9A1
Range: A:198-374
Ligands: SO4
PDB: 1upa
PDB Description: CARBOXYETHYLARGININE SYNTHASE
UniProt: Q9LCV9
Species: Streptomyces clavuligerus

Structure of domain e1upaA1

Domains in the same chain:

Download Pymol

e1upaA2 A:12-197 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1upaA1 A:198-374 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1upaA3 A:375-572 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

e1upaA2 A:12-197 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1upaA1 A:198-374 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1upaA3 A:375-572 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1upaB2 B:12-197 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1upaB1 B:198-374 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1upaB3 B:375-572 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1upaC2 C:12-197 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1upaC1 C:198-374 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1upaC3 C:375-563 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1upaD2 D:12-197 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)
e1upaD1 D:198-374 Rossmann-like Rossmann-related DHS-like NAD/FAD-binding domain
e1upaD3 D:375-572 Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding)

Structural contacts of domain e1upaA1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1upaB2 A:X,Y,Z->B:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e1upaC1 A:X,Y,Z->C:x,y,z Rossmann-related Interaction Interface Pymol
e1upaC2 A:X,Y,Z->C:x,y,z Thiamin diphosphate-binding fold (THDP-binding) Interaction Interface Pymol
e1upaB1 A:x,y,z->B:-X+1/2,-Y+1,Z-1/2 Rossmann-related Interaction Interface Pymol