ECOD: domain e1upcF1

Domain ID e1upcF1

A: a/b three-layered sandwiches
X: Rossmann-like
H: Rossmann-related
T: DHS-like NAD/FAD-binding domain
F: TPP_enzyme_M

UID:	000099301
Type:	Automatic domain
Parent:	e2ez9A1
Range:	F:198-374
Ligands:	SO4
PDB:	1upc
PDB Description:	CARBOXYETHYLARGININE SYNTHASE
UniProt:	Q9LCV9
Species:	Streptomyces clavuligerus

Domain
In chain context
In PDB context

Structure of domain e1upcF1

Domains in the same chain:

Download Pymol

e1upcF2	F:12-197	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcF1	F:198-374	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1upcF3	F:375-572	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)

Domains in the same PDB:

Structural contacts of domain e1upcF1 of H-group "Rossmann-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1upcE2	F:x,y,z->E:X,Y,Z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1upcE1	F:x,y,z->E:-X,-Y,Z	Rossmann-related	Interaction Interface Pymol
e1upcE2	F:x,y,z->E:-X,-Y,Z	Thiamin diphosphate-binding fold (THDP-binding)	Interaction Interface Pymol
e1upcB1	F:x,y,z->B:X-1/2,-Y+1/2,-Z+1	Rossmann-related	Interaction Interface Pymol

e1upcA2	A:12-197	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcA1	A:198-374	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1upcA3	A:375-572	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcB2	B:12-197	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcB1	B:198-374	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1upcB3	B:375-572	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcC2	C:12-197	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcC1	C:198-374	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1upcC3	C:375-572	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcD2	D:12-197	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcD1	D:198-374	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1upcD3	D:375-572	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcE2	E:12-197	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcE1	E:198-374	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1upcE3	E:375-572	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcF2	F:12-197	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)
e1upcF1	F:198-374	Rossmann-like	Rossmann-related	DHS-like NAD/FAD-binding domain
e1upcF3	F:375-572	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)	Thiamin diphosphate-binding fold (THDP-binding)