ECOD: domain e1v0eD1

Domain ID e1v0eD1

A: beta duplicates or obligate multimers
X: Single-stranded right-handed beta-helix
H: Pectin lyase-like
T: Pectin lyase-like
F: End_N_terminal

UID:	001338965
Type:	Automatic domain
Parent:	e1v0eA5
Range:	D:245-311
PDB:	1v0e
PDB Description:	ENDO-ALPHA-SIALIDASE
UniProt:	Q858B1
Species:	Enterobacteria phage K1F

Domains in the same chain:

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e1v0eD1	D:245-311	Single-stranded right-handed beta-helix	Pectin lyase-like	Pectin lyase-like
e1v0eD4	D:312-422,D:512-760	beta-propeller-like	beta-propeller	6-bladed
e1v0eD3	D:423-511	cradle loop barrel	RIFT-related	Alanine racemase-C
e1v0eD2	D:761-910	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain

Domains in the same PDB:

e1v0eA5	A:245-311	Single-stranded right-handed beta-helix	Pectin lyase-like	Pectin lyase-like
e1v0eA4	A:312-422,A:512-760	beta-propeller-like	beta-propeller	6-bladed
e1v0eA3	A:423-511	cradle loop barrel	RIFT-related	Alanine racemase-C
e1v0eA2	A:761-910	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain
e1v0eB1	B:245-311	Single-stranded right-handed beta-helix	Pectin lyase-like	Pectin lyase-like
e1v0eB4	B:312-422,B:512-760	beta-propeller-like	beta-propeller	6-bladed
e1v0eB3	B:423-511	cradle loop barrel	RIFT-related	Alanine racemase-C
e1v0eB2	B:761-910	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain
e1v0eC1	C:245-311	Single-stranded right-handed beta-helix	Pectin lyase-like	Pectin lyase-like
e1v0eC4	C:312-422,C:512-760	beta-propeller-like	beta-propeller	6-bladed
e1v0eC3	C:423-511	cradle loop barrel	RIFT-related	Alanine racemase-C
e1v0eC2	C:761-910	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain
e1v0eD1	D:245-311	Single-stranded right-handed beta-helix	Pectin lyase-like	Pectin lyase-like
e1v0eD4	D:312-422,D:512-760	beta-propeller-like	beta-propeller	6-bladed
e1v0eD3	D:423-511	cradle loop barrel	RIFT-related	Alanine racemase-C
e1v0eD2	D:761-910	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain
e1v0eE1	E:245-311	Single-stranded right-handed beta-helix	Pectin lyase-like	Pectin lyase-like
e1v0eE4	E:312-422,E:512-760	beta-propeller-like	beta-propeller	6-bladed
e1v0eE3	E:423-511	cradle loop barrel	RIFT-related	Alanine racemase-C
e1v0eE2	E:761-910	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain
e1v0eF1	F:245-311	Single-stranded right-handed beta-helix	Pectin lyase-like	Pectin lyase-like
e1v0eF4	F:312-422,F:512-760	beta-propeller-like	beta-propeller	6-bladed
e1v0eF3	F:423-511	cradle loop barrel	RIFT-related	Alanine racemase-C
e1v0eF2	F:761-910	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain	Phage tail fiber protein trimerization domain

Structural contacts of domain e1v0eD1 of H-group "Pectin lyase-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1v0eF1	D:X,Y,Z->F:x,y,z	Pectin lyase-like	Interaction Interface Pymol
e1v0eF4	D:X,Y,Z->F:x,y,z	beta-propeller	Interaction Interface Pymol
e1v0eF2	D:X,Y,Z->F:x,y,z	Phage tail fiber protein trimerization domain	Interaction Interface Pymol
e1v0eE1	D:X,Y,Z->E:x,y,z	Pectin lyase-like	Interaction Interface Pymol
e1v0eA5	D:x,y,z->A:X-1,Y-1,Z	Pectin lyase-like	Interaction Interface Pymol