Domain ID e1v0eD3

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: End_beta_barrel
UID: 001338967
Type: Automatic domain
Parent: e1v0eA3
Range: D:423-511
PDB: 1v0e
PDB Description: ENDO-ALPHA-SIALIDASE
UniProt: Q858B1
Species: Enterobacteria phage K1F

Structure of domain e1v0eD3

Domains in the same chain:

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e1v0eD1 D:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0eD4 D:312-422,D:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0eD3 D:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0eD2 D:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain

Domains in the same PDB:

e1v0eA5 A:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0eA4 A:312-422,A:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0eA3 A:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0eA2 A:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain
e1v0eB1 B:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0eB4 B:312-422,B:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0eB3 B:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0eB2 B:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain
e1v0eC1 C:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0eC4 C:312-422,C:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0eC3 C:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0eC2 C:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain
e1v0eD1 D:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0eD4 D:312-422,D:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0eD3 D:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0eD2 D:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain
e1v0eE1 E:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0eE4 E:312-422,E:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0eE3 E:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0eE2 E:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain
e1v0eF1 F:245-311 Single-stranded right-handed beta-helix Pectin lyase-like Pectin lyase-like
e1v0eF4 F:312-422,F:512-760 beta-propeller-like beta-propeller 6-bladed
e1v0eF3 F:423-511 cradle loop barrel RIFT-related Alanine racemase-C
e1v0eF2 F:761-910 Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain Phage tail fiber protein trimerization domain

Structural contacts of domain e1v0eD3 of H-group "RIFT-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1v0eE4 D:X,Y,Z->E:x,y,z beta-propeller Interaction Interface Pymol
e1v0eA4 D:x,y,z->A:X-1,Y,Z beta-propeller Interaction Interface Pymol
e1v0eC4 D:x,y,z->C:X,Y,Z beta-propeller Interaction Interface Pymol
e1v0eE1 D:X,-Y,-Z->E:x,y,z Pectin lyase-like Interaction Interface Pymol