Domain ID e1v34A2

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  • A: a+b complex topology
  • X: Prim-pol domain
  • H: Prim-pol domain
  • T: Prim-pol domain
  • F: DNA_primase_S
UID: 000080935
Type: Automatic domain
Parent: e1v33A2
Range: A:1-175,A:279-345
Ligands: UTP ZN
PDB: 1v34
PDB Description: DNA PRIMASE SMALL SUBUNIT
UniProt: O57934
Hsap BLAST neighbor: P49642
Species: Pyrococcus horikoshii

Structure of domain e1v34A2

Structural contacts of domain e1v34A2 of H-group "Prim-pol domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1v34A2 A:x,y,z->A:X-Y,-Y+1,-Z+1/3 Prim-pol domain Interaction Interface Pymol
e1v34A2 A:X-Y,-Y+1,-Z+1/3->A:x,y,z Prim-pol domain Interaction Interface Pymol
e1v34A1 A:X-Y,-Y+1,-Z+1/3->A:x,y,z Insert all-alpha domain in prim-pol Interaction Interface Pymol
e1v34A2 A:x,y,z->A:Y,X,-Z Prim-pol domain Interaction Interface Pymol
e1v34A2 A:Y,X,-Z->A:x,y,z Prim-pol domain Interaction Interface Pymol
e1v34A2 A:x,y,z->A:X-Y+1,-Y+2,-Z+1/3 Prim-pol domain Interaction Interface Pymol
e1v34A2 A:X-Y+1,-Y+2,-Z+1/3->A:x,y,z Prim-pol domain Interaction Interface Pymol
e1v34A1 A:x,y,z->A:-Y+1,X-Y,Z-1/3 Insert all-alpha domain in prim-pol Interaction Interface Pymol
e1v34A1 A:-X+1,-X+Y,-Z+2/3->A:x,y,z Insert all-alpha domain in prim-pol Interaction Interface Pymol
e1v34A2 A:x,y,z->A:-Y+2,X-Y+1,Z-1/3 Prim-pol domain Interaction Interface Pymol
e1v34A2 A:-Y+2,X-Y+1,Z-1/3->A:x,y,z Prim-pol domain Interaction Interface Pymol