ECOD: domain e1vdvA1

Domain ID e1vdvA1

A: alpha bundles
X: CO dehydrogenase ISP C-domain like
H: CO dehydrogenase ISP C-domain like
T: CO dehydrogenase ISP C-domain like
F: Fer2_2

UID:	000057056
Type:	Automatic domain
Parent:	e1v97A1
Range:	A:93-165
Ligands:	FES MTE
PDB:	1vdv
PDB Description:	XANTHINE DEHYDROGENASE/OXIDASE
UniProt:	P80457
Hsap BLAST neighbor:	P47989
Species:	Bos taurus

Domains in the same chain:

Download Pymol

e1vdvA3	A:3-92	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e1vdvA1	A:93-165	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like
e1vdvA5	A:192-414	FAD-binding domain-like	FAD-binding domain	FAD-binding domain
e1vdvA4	A:415-528	FAD-linked reductases, C-terminal domain-like	SufE/NifU	SufE/NifU
e1vdvA6	A:537-694	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	CO dehydrogenase molybdoprotein N-domain-like
e1vdvA7	A:695-954	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain
e1vdvA2	A:955-1332	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain

Domains in the same PDB:

e1vdvA3	A:3-92	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e1vdvA1	A:93-165	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like
e1vdvA5	A:192-414	FAD-binding domain-like	FAD-binding domain	FAD-binding domain
e1vdvA4	A:415-528	FAD-linked reductases, C-terminal domain-like	SufE/NifU	SufE/NifU
e1vdvA6	A:537-694	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	CO dehydrogenase molybdoprotein N-domain-like
e1vdvA7	A:695-954	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain
e1vdvA2	A:955-1332	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain
e1vdvB3	B:3-92	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e1vdvB1	B:93-165	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like
e1vdvB5	B:192-414	FAD-binding domain-like	FAD-binding domain	FAD-binding domain
e1vdvB4	B:415-528	FAD-linked reductases, C-terminal domain-like	SufE/NifU	SufE/NifU
e1vdvB6	B:537-694	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	CO dehydrogenase molybdoprotein N-domain-like
e1vdvB2	B:695-954	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain
e1vdvB7	B:955-1332	MocoBD/DmpA-related	MocoBD/DmpA-related	Molybdenum cofactor-binding domain

Structural contacts of domain e1vdvA1 of H-group "CO dehydrogenase ISP C-domain like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vdvB2	A:X,Y,Z->B:x,y,z	MocoBD/DmpA-related	Interaction Interface Pymol
e1vdvA4	A:x,y,z->A:-X+1/2,Y-1/2,-Z	SufE/NifU	Interaction Interface Pymol