Domain ID e1vdvB5

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  • A: a+b complex topology
  • X: FAD-binding domain-like
  • H: FAD-binding domain
  • T: FAD-binding domain
  • F: FAD_binding_5
UID: 000080879
Type: Automatic domain
Parent: e1n62C2
Range: B:192-414
Ligands: FAD GOL
PDB: 1vdv
PDB Description: XANTHINE DEHYDROGENASE/OXIDASE
UniProt: P80457
Hsap BLAST neighbor: P47989
Species: Bos taurus

Structure of domain e1vdvB5

Domains in the same chain:

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e1vdvB3 B:3-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e1vdvB1 B:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e1vdvB5 B:192-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e1vdvB4 B:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e1vdvB6 B:537-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e1vdvB2 B:695-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1vdvB7 B:955-1332 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Domains in the same PDB:

e1vdvA3 A:3-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e1vdvA1 A:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e1vdvA5 A:192-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e1vdvA4 A:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e1vdvA6 A:537-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e1vdvA7 A:695-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1vdvA2 A:955-1332 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1vdvB3 B:3-92 beta-Grasp Ubiquitin-related Ubiquitin-like
e1vdvB1 B:93-165 CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like CO dehydrogenase ISP C-domain like
e1vdvB5 B:192-414 FAD-binding domain-like FAD-binding domain FAD-binding domain
e1vdvB4 B:415-528 FAD-linked reductases, C-terminal domain-like SufE/NifU SufE/NifU
e1vdvB6 B:537-694 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid CO dehydrogenase molybdoprotein N-domain-like
e1vdvB2 B:695-954 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain
e1vdvB7 B:955-1332 MocoBD/DmpA-related MocoBD/DmpA-related Molybdenum cofactor-binding domain

Structural contacts of domain e1vdvB5 of H-group "FAD-binding domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vdvA2 B:x,y,z->A:X-1/2,Y-1/2,Z MocoBD/DmpA-related Interaction Interface Pymol