Domain ID e1vf5P3

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Single hybrid motif
  • F: Apocytochr_F_C
UID: 000085427
Type: Automatic domain
Parent: e1e2wA2
Range: P:170-231
PDB: 1vf5
PDB Description: CYTOCHROME F
UniProt: P83793
Species: Mastigocladus laminosus

Structure of domain e1vf5P3

Domains in the same chain:

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e1vf5P1 P:1-169,P:232-249 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e1vf5P3 P:170-231 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e1vf5P2 P:251-286 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor

Domains in the same PDB:

e1vf5A1 A:13-214 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e1vf5B1 B:18-155 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1vf5C1 C:1-169,C:232-249 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e1vf5C3 C:170-231 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e1vf5C2 C:251-286 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
e1vf5D5 D:12-47 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e1vf5D6 D:48-106,D:148-179 ISP domain ISP domain ISP domain
e1vf5D4 D:107-147 Trm112p-like Trm112p-like Trm112p-like
e1vf5E1 E:1-32 PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex
e1vf5F1 F:1-32 PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex
e1vf5H1 H:3-29 PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex
e1vf5N1 N:13-214 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e1vf5O1 O:18-155 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e1vf5P1 P:1-169,P:232-249 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e1vf5P3 P:170-231 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e1vf5P2 P:251-286 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
e1vf5Q5 Q:12-47 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e1vf5Q6 Q:48-106,Q:148-179 ISP domain ISP domain ISP domain
e1vf5Q4 Q:107-147 Trm112p-like Trm112p-like Trm112p-like
e1vf5R1 R:1-32 PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex
e1vf5S1 S:1-32 PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex
e1vf5U1 U:3-29 PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex

Structural contacts of domain e1vf5P3 of H-group "alpha/beta-Hammerhead/Barrel-sandwich hybrid":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vf5C1 P:x,y,z->C:-Y,X-Y-1,Z+1/3 Immunoglobulin-related Interaction Interface Pymol