ECOD: domain e1vgyA1

Domain ID e1vgyA1

A: a+b two layers
X: Alpha-beta plaits
H: Bacterial exopeptidase dimerisation domain
T: Bacterial exopeptidase dimerisation domain
F: M20_dimer

UID:	000005307
Type:	Manual and representative domain
Range:	A:181-293
PDB:	1vgy
PDB Description:	succinyl-diaminopimelate desuccinylase
UniProt:	Q9JYL2
Species:

Domains in the same chain:

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e1vgyA2	A:2-180,A:294-376	Phosphorylase/hydrolase-like	Zn-dependent exopeptidases	Zn-dependent exopeptidases
e1vgyA1	A:181-293	Alpha-beta plaits	Bacterial exopeptidase dimerisation domain	Bacterial exopeptidase dimerisation domain

Domains in the same PDB:

e1vgyA2	A:2-180,A:294-376	Phosphorylase/hydrolase-like	Zn-dependent exopeptidases	Zn-dependent exopeptidases
e1vgyA1	A:181-293	Alpha-beta plaits	Bacterial exopeptidase dimerisation domain	Bacterial exopeptidase dimerisation domain
e1vgyB2	B:2-180,B:294-376	Phosphorylase/hydrolase-like	Zn-dependent exopeptidases	Zn-dependent exopeptidases
e1vgyB1	B:181-293	Alpha-beta plaits	Bacterial exopeptidase dimerisation domain	Bacterial exopeptidase dimerisation domain

Structural contacts of domain e1vgyA1 of H-group "Bacterial exopeptidase dimerisation domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vgyB1	A:X,Y,Z->B:x,y,z	Bacterial exopeptidase dimerisation domain	Interaction Interface Pymol
e1vgyB2	A:X,Y,Z->B:x,y,z	Zn-dependent exopeptidases	Interaction Interface Pymol
e1vgyA2	A:-X+1,Y-1/2,-Z->A:x,y,z	Zn-dependent exopeptidases	Interaction Interface Pymol