Domain ID e1vgyA2

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  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Zn-dependent exopeptidases
  • T: Zn-dependent exopeptidases
  • F: Peptidase_M20
UID: 000010164
Type: Manual and representative domain
Range: A:2-180,A:294-376
PDB: 1vgy
PDB Description: succinyl-diaminopimelate desuccinylase
UniProt: Q9JYL2
Hsap BLAST neighbor: Q96KP4
Species:

Structure of domain e1vgyA2

Structural contacts of domain e1vgyA2 of H-group "Zn-dependent exopeptidases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vgyB1 A:X,Y,Z->B:x,y,z Bacterial exopeptidase dimerisation domain Interaction Interface Pymol
e1vgyA1 A:x,y,z->A:-X+1,Y-1/2,-Z Bacterial exopeptidase dimerisation domain Interaction Interface Pymol
e1vgyB2 A:x,y,z->B:-X,Y-1/2,-Z Zn-dependent exopeptidases Interaction Interface Pymol
e1vgyB2 A:x,y,z->B:X,Y-1,Z Zn-dependent exopeptidases Interaction Interface Pymol
e1vgyB2 A:x,y,z->B:-X,Y-3/2,-Z Zn-dependent exopeptidases Interaction Interface Pymol