Domain ID e1vorY1

Download files:
  • A: alpha bundles
  • X: Long alpha-hairpin
  • H: Ribosomal protein L29 (L29p)
  • T: Ribosomal protein L29 (L29p)
  • F: Ribosomal_L29
UID: 000274007
Type: Automatic domain
Parent: e1vqoV1
Range: Y:2-66
PDB: 1vor
PDB Description:
Species:

Structure of domain e1vorY1

Domains in the same chain:

Download Pymol

e1vorY1 Y:2-66 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)

Domains in the same PDB:

e1vor11 1:1-73 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e1vor21 2:2-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1vor41 4:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e1vor51 5:2-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e1vor61 6:2-36 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e1vor71 7:1-57,7:154-217 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e1vor72 7:58-153 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e1vorD3 D:4-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1vorD4 D:127-273 SH3 SH3 SH3
e1vorF1 F:2-198 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e1vorG1 G:2-179 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e1vorH1 H:5-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vorH2 H:83-181 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vorI1 I:1-52 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e1vorJ3 J:1-72 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e1vorJ4 J:73-143 HTH HTH Ribosomal protein L11, C-terminal domain
e1vorK1 K:29-171 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e1vorL1 L:2-133 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e1vorO1 O:3-116 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e1vorR1 R:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e1vorS1 S:1-100 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e1vorT1 T:5-134 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e1vorU1 U:2-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e1vorV1 V:2-114 SH3 SH3 SH3
e1vorW1 W:1-88 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e1vorW2 W:89-173 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e1vorX1 X:2-87 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e1vorY1 Y:2-66 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e1vorZ1 Z:1-55 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e

Structural contacts of domain e1vorY1 of H-group "Ribosomal protein L29 (L29p)":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vorU1 Y:x,y,z->U:X,Y,Z Ribosomal proteins S24e, L23 and L15e Interaction Interface Pymol