ECOD: domain e1vow21

Domain ID e1vow21

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: Ribosomal_L32p

UID:	000274124
Type:	Automatic domain
Parent:	e2j0151
Range:	2:2-59
PDB:	1vow
PDB Description:
Species:

Domains in the same chain:

Download Pymol

e1vow21	2:2-59	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e1vow11	1:1-73	Ribosomal protein L31p	Ribosomal protein L31p	Ribosomal protein L31p
e1vow21	2:2-59	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1vow41	4:1-46	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e1vow51	5:2-64	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e1vow61	6:2-36	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e1vow71	7:1-57,7:154-217	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e1vow72	7:58-153	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1
e1vowD1	D:4-127	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1vowD2	D:128-273	SH3	SH3	SH3
e1vowF1	F:2-198	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e1vowG1	G:2-179	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e1vowH1	H:5-82	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e1vowH2	H:83-181	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e1vowI1	I:1-52	L9 N-domain-like	L9 N-domain-like	L9 N-domain-like
e1vowJ5	J:1-72	Ribosomal protein L11/L12e N-terminal domain-like	Ribosomal protein L11/L12e N-terminal domain	Ribosomal protein L11/L12e N-terminal domain
e1vowJ6	J:73-143	HTH	HTH	Ribosomal protein L11, C-terminal domain
e1vowK1	K:29-171	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e1vowL1	L:2-133	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e1vowO1	O:3-116	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e1vowR1	R:2-118	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e1vowS1	S:1-100	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e1vowT1	T:5-134	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e1vowU1	U:2-94	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e1vowV1	V:2-114	SH3	SH3	SH3
e1vowW4	W:1-88	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e1vowW3	W:89-173	Ribosomal protein TL5/L25 C-terminal domain-like	Ribosomal protein TL5/L25 C-terminal domain-related	Ribosomal protein TL5/L25 C-terminal domain-related
e1vowX1	X:2-87	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e1vowY1	Y:2-66	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e1vowZ1	Z:1-55	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e

Structural contacts of domain e1vow21 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vowT1	2:x,y,z->T:X,Y,Z	Ribosomal protein L22	Interaction Interface Pymol
e1vowO1	2:x,y,z->O:X,Y,Z	Prokaryotic ribosomal protein L17	Interaction Interface Pymol