Domain ID e1vpkA1

Download files:
  • A: a+b two layers
  • X: DNA clamp
  • H: DNA clamp
  • T: DNA clamp
  • F: DNA_pol3_beta
UID: 000005977
Type: Manual and representative domain
Range: A:1-120
PDB: 1vpk
PDB Description: DNA polymerase III, beta subunit
UniProt: Q9WYA0
Species:

Structure of domain e1vpkA1

Structural contacts of domain e1vpkA1 of H-group "DNA clamp":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vpkA3 A:x,y,z->A:-Y+1,-X+1,-Z DNA clamp Interaction Interface Pymol
e1vpkA3 A:-Y+1,-X+1,-Z->A:x,y,z DNA clamp Interaction Interface Pymol
e1vpkA2 A:x,y,z->A:-X+1,-Y+1,Z DNA clamp Interaction Interface Pymol
e1vpkA1 A:x,y,z->A:-X+1,-Y+1,Z DNA clamp Interaction Interface Pymol
e1vpkA2 A:-X+1,-Y+1,Z->A:x,y,z DNA clamp Interaction Interface Pymol
e1vpkA1 A:-X+1,-Y+1,Z->A:x,y,z DNA clamp Interaction Interface Pymol
e1vpkA3 A:X-1/2,-Y+1/2,-Z+1/2->A:x,y,z DNA clamp Interaction Interface Pymol
e1vpkA2 A:X-1/2,-Y+1/2,-Z+1/2->A:x,y,z DNA clamp Interaction Interface Pymol
e1vpkA2 A:-X+3/2,Y-1/2,-Z+1/2->A:x,y,z DNA clamp Interaction Interface Pymol