Domain ID e1vqpO1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L13/L15p/L18e/L32e
  • H: Ribosomal proteins L15p and L18e
  • T: Ribosomal proteins L15p and L18e
  • F: Ribosomal_L27A
UID: 000118901
Type: Automatic domain
Parent: e1vqoL1
Range: O:1-115
Ligands: CD CL
PDB: 1vqp
PDB Description: 50S RIBOSOMAL PROTEIN L18E
UniProt: P12733
Species: Haloarcula marismortui

Structure of domain e1vqpO1

Domains in the same chain:

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e1vqpO1 O:1-115 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e

Domains in the same PDB:

e1vqp11 1:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1vqp21 2:1-49 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e1vqp31 3:1-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1vqpA1 A:1-90 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1vqpA2 A:91-237 SH3 SH3 SH3
e1vqpB1 B:1-337 cradle loop barrel RIFT-related Alanine racemase-C
e1vqpC1 C:1-246 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e1vqpD1 D:10-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e1vqpE1 E:1-79 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vqpE2 E:80-172 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vqpF1 F:1-119 Bacillus chorismate mutase-like L30e-like L30e-like
e1vqpG1 G:12-29,G:63-73 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e1vqpH1 H:1-163 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e1vqpI1 I:71-140 HTH HTH Ribosomal protein L11, C-terminal domain
e1vqpJ1 J:9-145 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e1vqpK1 K:1-132 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e1vqpL1 L:1-150 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e1vqpM1 M:1-194 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e1vqpN1 N:1-186 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1vqpO1 O:1-115 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e1vqpP1 P:1-54 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e1vqpP2 P:55-142 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e1vqpQ1 Q:1-95 SH3 SH3 SH3
e1vqpR1 R:1-150 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e1vqpS1 S:1-81 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e1vqpT1 T:1-119 SH3 SH3 SH3
e1vqpU1 U:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e1vqpV1 V:1-65 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e1vqpW1 W:1-154 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e1vqpX1 X:7-88 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e1vqpY1 Y:95-236 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e1vqpZ1 Z:10-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Structural contacts of domain e1vqpO1 of H-group "Ribosomal proteins L15p and L18e":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vqpC1 O:x,y,z->C:X,Y,Z Ribosomal protein L4 Interaction Interface Pymol
e1vqpL1 O:x,y,z->L:X,Y,Z Ribosomal proteins L15p and L18e Interaction Interface Pymol