Domain ID e1vvqX1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Ribosomal proteins S24e, L23 and L15e
  • T: Ribosomal proteins S24e, L23 and L15e
  • F: Ribosomal_L23
UID: 001318872
Type: Automatic domain
Parent: e2j01X1
Range: X:3-94
PDB: 1vvq
PDB Description:
Species:

Structure of domain e1vvqX1

Domains in the same chain:

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e1vvqX1 X:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e

Domains in the same PDB:

e1vvq01 0:2-83 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e1vvq11 1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e1vvq21 2:4-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e1vvq31 3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e1vvq41 4:1-50 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e1vvq51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1vvq71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e1vvq81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e1vvq91 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e1vvqD2 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1vvqD1 D:127-273 SH3 SH3 SH3
e1vvqF1 F:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e1vvqG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e1vvqH2 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vvqH1 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vvqI1 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e1vvqI2 I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e1vvqN1 N:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e1vvqO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e1vvqR1 R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e1vvqU1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e1vvqV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e1vvqW1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e1vvqX1 X:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e1vvqY1 Y:2-103 SH3 SH3 SH3
e1vvqZ1 Z:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e1vvqZ2 Z:93-183 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e1vvqX1 of H-group "Ribosomal proteins S24e, L23 and L15e":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vvq21 X:X,Y,Z->2:x,y,z Ribosomal protein L29 (L29p) Interaction Interface Pymol
e1vvq71 X:X,Y,Z->7:x,y,z 50S ribosomal protein L34 Interaction Interface Pymol