Domain ID e1vvtN1

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  • A: few secondary structure elements
  • X: Glucocorticoid receptor-like
  • H: LIM domain-like
  • T: LIM domain-like
  • F: Ribosomal_S14
UID: 001318956
Type: Automatic domain
Parent: e2uubN1
Range: N:2-61
Ligands: ZN
PDB: 1vvt
PDB Description:
Species:

Structure of domain e1vvtN1

Domains in the same chain:

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e1vvtN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like

Domains in the same PDB:

e1vvtC2 C:2-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e1vvtC1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e1vvtE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1vvtE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1vvtF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e1vvtG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e1vvtH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1vvtH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e1vvtJ1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e1vvtK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1vvtL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1vvtN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e1vvtO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e1vvtP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e1vvtR1 R:19-88 HTH HTH tri-helical
e1vvtT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e1vvtN1 of H-group "LIM domain-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vvtC2 N:x,y,z->C:X,Y,Z KH-domains Interaction Interface Pymol
e1vvtJ1 N:x,y,z->J:X,Y,Z Ribosomal protein S10 Interaction Interface Pymol