ECOD: domain e1vvxR1

Domain ID e1vvxR1

A: alpha arrays
X: HTH
H: HTH
T: tri-helical
F: Ribosomal_S18

UID:	001319070
Type:	Automatic domain
Parent:	e2uubR1
Range:	R:19-88
PDB:	1vvx
PDB Description:
Hsap BLAST neighbor:	Q9Y3D5
Species:

Domain
In chain context
In PDB context

Structure of domain e1vvxR1

Domains in the same chain:

Download Pymol

e1vvxR1	R:19-88	HTH	HTH	tri-helical

Domains in the same PDB:

e1vvxC2	C:2-105	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e1vvxC1	C:106-206	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e1vvxE1	E:5-73	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e1vvxE2	E:74-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1vvxF1	F:1-101	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e1vvxG1	G:2-156	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e1vvxH1	H:1-66	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e1vvxH2	H:67-138	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e1vvxJ1	J:3-101	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e1vvxK1	K:11-129	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e1vvxL1	L:5-129	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1vvxN1	N:2-61	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e1vvxO1	O:2-89	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e1vvxP1	P:1-84	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e1vvxR1	R:19-88	HTH	HTH	tri-helical
e1vvxT1	T:8-106	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20

Structural contacts of domain e1vvxR1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vvxF1	R:x,y,z->F:X,Y,Z	Ribosomal protein S6	Interaction Interface Pymol
e1vvxK1	R:x,y,z->K:X,Y,Z	Ribonuclease H-like	Interaction Interface Pymol