Domain ID e1vvzK1

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_S11
UID: 001319118
Type: Automatic domain
Parent: e2uubK1
Range: K:11-129
PDB: 1vvz
PDB Description:
Hsap BLAST neighbor: P82912
Species:

Structure of domain e1vvzK1

Domains in the same chain:

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e1vvzK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e1vvzC2 C:2-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e1vvzC1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e1vvzE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1vvzE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1vvzF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e1vvzG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e1vvzH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1vvzH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e1vvzJ1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e1vvzK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1vvzL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1vvzN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e1vvzO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e1vvzP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e1vvzR1 R:19-88 HTH HTH tri-helical
e1vvzT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e1vvzK1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vvzR1 K:X,Y,Z->R:x,y,z HTH Interaction Interface Pymol
e1vvzG1 K:x,y,z->G:X,Y,Z Ribosomal protein S7 Interaction Interface Pymol