Domain ID e1vxl01

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Ribosomal L27 protein
  • F: Ribosomal_L27
UID: 001319316
Type: Automatic domain
Parent: e3j6bR1
Range: 0:2-83
Ligands: MG
PDB: 1vxl
PDB Description:
Hsap BLAST neighbor: Q9P0M9
Species:

Structure of domain e1vxl01

Domains in the same chain:

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e1vxl01 0:2-83 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein

Domains in the same PDB:

e1vxl01 0:2-83 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e1vxl11 1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e1vxl21 2:4-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e1vxl31 3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e1vxl41 4:1-50 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e1vxl51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1vxl71 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e1vxl81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e1vxl91 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e1vxlD2 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1vxlD1 D:127-273 SH3 SH3 SH3
e1vxlF1 F:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e1vxlG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e1vxlH2 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vxlH1 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vxlI1 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e1vxlI2 I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e1vxlN1 N:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e1vxlO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e1vxlR1 R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e1vxlU1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e1vxlV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e1vxlW1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e1vxlX1 X:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e1vxlY1 Y:2-103 SH3 SH3 SH3
e1vxlZ1 Z:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e1vxlZ2 Z:93-183 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e1vxl01 of H-group "alpha/beta-Hammerhead/Barrel-sandwich hybrid":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e3j6bR1 0:x,y,z->Q:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol
e3j6bR1 0:x,y,z->S:X,Y,Z alpha/beta-Hammerhead/Barrel-sandwich hybrid Interaction Interface Pymol