Domain ID e1vxmH1

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  • A: a+b two layers
  • X: R3H domain-like
  • H: Ribosomal protein S8, N-terminal domain
  • T: Ribosomal protein S8, N-terminal domain
  • F: Ribosomal_S8
UID: 001319334
Type: Automatic domain
Parent: e1seiA1
Range: H:1-66
PDB: 1vxm
PDB Description:
Species:

Structure of domain e1vxmH1

Domains in the same chain:

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e1vxmH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1vxmH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e1vxmC2 C:2-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e1vxmC1 C:106-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e1vxmE1 E:5-73 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1vxmE2 E:74-155 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1vxmF1 F:1-101 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e1vxmG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e1vxmH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1vxmH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e1vxmJ1 J:3-101 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e1vxmK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1vxmL1 L:5-129 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1vxmN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e1vxmO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e1vxmP1 P:1-84 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e1vxmR1 R:19-88 HTH HTH tri-helical
e1vxmT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e1vxmH1 of H-group "Ribosomal protein S8, N-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vxmE2 H:x,y,z->E:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol