ECOD: domain e1vxnZ1

Domain ID e1vxnZ1

A: beta barrels
X: Ribosomal protein L25-like
H: Ribosomal protein L25-like
T: Ribosomal protein L25-like
F: Ribosomal_L25p

UID:	001319369
Type:	Automatic domain
Parent:	e1feuA1
Range:	Z:1-92
PDB:	1vxn
PDB Description:
Species:

Domains in the same chain:

Download Pymol

e1vxnZ1	Z:1-92	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e1vxnZ2	Z:93-183	Ribosomal protein TL5/L25 C-terminal domain-like	Ribosomal protein TL5/L25 C-terminal domain-related	Ribosomal protein TL5/L25 C-terminal domain-related

Domains in the same PDB:

e1vxn01	0:2-83	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e1vxn11	1:2-98	Ribosomal protein bL28-related	Ribosomal protein bL28-related	Ribosomal protein L28
e1vxn21	2:4-72	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e1vxn31	3:2-60	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e1vxn41	4:1-50	Ribosomal protein L31p	Ribosomal protein L31p	Ribosomal protein L31p
e1vxn51	5:2-60	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1vxn71	7:1-49	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e1vxn81	8:2-65	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e1vxn91	9:1-37	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e1vxnD2	D:2-126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1vxnD1	D:127-273	SH3	SH3	SH3
e1vxnF1	F:6-207	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e1vxnG1	G:2-182	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e1vxnH2	H:2-82	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e1vxnH1	H:83-171	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e1vxnI1	I:1-53	L9 N-domain-like	L9 N-domain-like	L9 N-domain-like
e1vxnI2	I:54-146	Ribosomal protein L9 C-domain	Ribosomal protein L9 C-domain	Ribosomal protein L9 C-domain
e1vxnN1	N:1-138	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e1vxnO1	O:1-122	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e1vxnR1	R:1-118	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e1vxnU1	U:2-118	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e1vxnV1	V:1-101	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e1vxnW1	W:1-113	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e1vxnX1	X:3-94	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e1vxnY1	Y:2-103	SH3	SH3	SH3
e1vxnZ1	Z:1-92	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e1vxnZ2	Z:93-183	Ribosomal protein TL5/L25 C-terminal domain-like	Ribosomal protein TL5/L25 C-terminal domain-related	Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e1vxnZ1 of H-group "Ribosomal protein L25-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1feuA1	Z:x,y,z->Q:X,Y,Z	Ribosomal protein L25-like	Interaction Interface Pymol