ECOD: domain e1vxpF1

Domain ID e1vxpF1

A: a+b two layers
X: Alpha-beta plaits
H: Ribosomal protein S6
T: Ribosomal protein S6
F: Ribosomal_S6

UID:	001319387
Type:	Automatic domain
Parent:	e1louA1
Range:	F:1-101
Ligands:	MG
PDB:	1vxp
PDB Description:
Species:

Domains in the same chain:

Download Pymol

e1vxpF1	F:1-101	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6

Domains in the same PDB:

e1vxpC2	C:2-105	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e1vxpC1	C:106-206	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e1vxpE1	E:5-73	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e1vxpE2	E:74-155	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e1vxpF1	F:1-101	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e1vxpG1	G:2-156	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e1vxpH1	H:1-66	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e1vxpH2	H:67-138	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e1vxpJ1	J:3-101	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e1vxpK1	K:11-129	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e1vxpL1	L:5-129	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1vxpN1	N:2-61	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e1vxpO1	O:2-89	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e1vxpP1	P:1-84	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e1vxpR1	R:19-88	HTH	HTH	tri-helical
e1vxpT1	T:8-106	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20

Structural contacts of domain e1vxpF1 of H-group "Ribosomal protein S6":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1vxpR1	F:X,Y,Z->R:x,y,z	HTH	Interaction Interface Pymol