ECOD: domain e1vxtZ1

Domain ID e1vxtZ1

A: beta barrels
X: Ribosomal protein L25-like
H: Ribosomal protein L25-like
T: Ribosomal protein L25-like
F: Ribosomal_L25p

UID:	001319479
Type:	Automatic domain
Parent:	e1feuA1
Range:	Z:1-92
PDB:	1vxt
PDB Description:
Species:

Domains in the same chain:

Download Pymol

e1vxtZ1	Z:1-92	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e1vxtZ2	Z:93-183	Ribosomal protein TL5/L25 C-terminal domain-like	Ribosomal protein TL5/L25 C-terminal domain-related	Ribosomal protein TL5/L25 C-terminal domain-related

Domains in the same PDB:

e1vxt01	0:2-83	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e1vxt11	1:2-98	Ribosomal protein bL28-related	Ribosomal protein bL28-related	Ribosomal protein L28
e1vxt21	2:4-72	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e1vxt31	3:2-60	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e1vxt41	4:1-50	Ribosomal protein L31p	Ribosomal protein L31p	Ribosomal protein L31p
e1vxt51	5:2-60	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e1vxt71	7:1-49	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e1vxt81	8:2-65	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e1vxt91	9:1-37	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e1vxtD2	D:2-126	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e1vxtD1	D:127-273	SH3	SH3	SH3
e1vxtF1	F:6-207	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e1vxtG1	G:2-182	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e1vxtH2	H:2-82	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e1vxtH1	H:83-171	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e1vxtI1	I:1-53	L9 N-domain-like	L9 N-domain-like	L9 N-domain-like
e1vxtI2	I:54-146	Ribosomal protein L9 C-domain	Ribosomal protein L9 C-domain	Ribosomal protein L9 C-domain
e1vxtN1	N:1-138	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e1vxtO1	O:1-122	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e1vxtR1	R:1-118	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e1vxtU1	U:2-118	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e1vxtV1	V:1-101	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e1vxtW1	W:1-113	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e1vxtX1	X:3-94	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e1vxtY1	Y:2-103	SH3	SH3	SH3
e1vxtZ1	Z:1-92	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e1vxtZ2	Z:93-183	Ribosomal protein TL5/L25 C-terminal domain-like	Ribosomal protein TL5/L25 C-terminal domain-related	Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e1vxtZ1 of H-group "Ribosomal protein L25-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1feuA1	Z:x,y,z->Q:X,Y,Z	Ribosomal protein L25-like	Interaction Interface Pymol