Domain ID e1vy1V1

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  • A: beta barrels
  • X: Ribosomal protein L21p
  • H: Ribosomal protein L21p
  • T: Ribosomal protein L21p
  • F: Ribosomal_L21p
UID: 001323259
Type: Automatic domain
Parent: e2j01V1
Range: V:1-101
PDB: 1vy1
PDB Description:
Species:

Structure of domain e1vy1V1

Domains in the same chain:

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e1vy1V1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p

Domains in the same PDB:

e1vy101 0:2-83 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e1vy111 1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e1vy121 2:4-72 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e1vy131 3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e1vy141 4:1-50 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e1vy151 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e1vy171 7:1-49 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e1vy181 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e1vy191 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e1vy1D2 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1vy1D1 D:127-273 SH3 SH3 SH3
e1vy1F1 F:6-207 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e1vy1G1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e1vy1H2 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vy1H1 H:83-171 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e1vy1I1 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e1vy1I2 I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e1vy1N1 N:1-138 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e1vy1O1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e1vy1R1 R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e1vy1U1 U:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e1vy1V1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e1vy1W1 W:1-113 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e1vy1X1 X:3-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e1vy1Y1 Y:2-103 SH3 SH3 SH3
e1vy1Z1 Z:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e1vy1Z2 Z:93-183 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e1vy1V1 of H-group "Ribosomal protein L21p":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1vy1U1 V:x,y,z->U:X,Y,Z Ribosomal protein L20 Interaction Interface Pymol
e1vy1U1 V:x,y,z->P:X,Y,Z Ribosomal protein L20 Interaction Interface Pymol
e1vy1N1 V:x,y,z->N:X,Y,Z Ribosomal protein L13 and L16-A Interaction Interface Pymol