Domain ID e1wn7A3

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  • A: alpha bundles
  • X: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • H: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • T: "thumb" domain in bacteriophage RB69-like DNA polymerase I
  • F: DNA_pol_B
UID: 000057816
Type: Automatic domain
Parent: e1tgoA3
Range: A:610-756
PDB: 1wn7
PDB Description: FAMILY B DNA POLYMERASE
UniProt: D0VWU9
Hsap BLAST neighbor: P09884
Species:

Structure of domain e1wn7A3

Domains in the same chain:

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e1wn7A1 A:1-33,A:114-132 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1wn7A5 A:34-113 Alpha-beta plaits Family B DNA polymerase insertion domain Family B DNA polymerase insertion domain
e1wn7A6 A:133-346 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1wn7A4 A:348-446,A:501-609 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1wn7A2 A:447-500 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e1wn7A3 A:610-756 "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I

Domains in the same PDB:

e1wn7A1 A:1-33,A:114-132 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1wn7A5 A:34-113 Alpha-beta plaits Family B DNA polymerase insertion domain Family B DNA polymerase insertion domain
e1wn7A6 A:133-346 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1wn7A4 A:348-446,A:501-609 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e1wn7A2 A:447-500 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e1wn7A3 A:610-756 "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I

Structural contacts of domain e1wn7A3 of H-group ""thumb" domain in bacteriophage RB69-like DNA polymerase I":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1wn7A1 A:x,y,z->A:X-1/2,-Y+1/2,-Z+1 Nucleic acid-binding proteins Interaction Interface Pymol
e1wn7A3 A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 "thumb" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e1wn7A4 A:x,y,z->A:-X+1/2,-Y+1,Z-1/2 Adenylyl and guanylyl cyclase catalytic domain-like Interaction Interface Pymol
e1wn7A3 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z "thumb" domain in bacteriophage RB69-like DNA polymerase I Interaction Interface Pymol
e1wn7A6 A:-X+1/2,-Y+1,Z-1/2->A:x,y,z Ribonuclease H-like Interaction Interface Pymol