Domain ID e1xmoK1

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_S11
UID: 000114761
Type: Automatic domain
Parent: e2uubK1
Range: K:11-129
PDB: 1xmo
PDB Description: 30S ribosomal protein S11
UniProt: P80376
Hsap BLAST neighbor: P82912
Species: Thermus thermophilus

Structure of domain e1xmoK1

Domains in the same chain:

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e1xmoK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e1xmoB1 B:7-127,B:157-240 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e1xmoC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e1xmoC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e1xmoD1 D:2-209 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e1xmoE1 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e1xmoE2 E:74-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1xmoF1 F:1-97 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e1xmoG1 G:12-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e1xmoH1 H:1-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e1xmoH2 H:67-137 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e1xmoI1 I:2-128 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e1xmoJ1 J:3-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e1xmoK1 K:11-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e1xmoL1 L:5-122 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xmoM1 M:2-126 HhH/H2TH H2TH H2TH
e1xmoN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e1xmoO1 O:3-87 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e1xmoP1 P:1-83 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e1xmoQ1 Q:2-105 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xmoR1 R:19-88 HTH HTH tri-helical
e1xmoS1 S:2-81 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e1xmoT1 T:8-106 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e1xmoK1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1xmoR1 K:X,Y,Z->R:x,y,z HTH Interaction Interface Pymol
e1xmoG1 K:x,y,z->G:X,Y,Z Ribosomal protein S7 Interaction Interface Pymol