Domain ID e1xpoD2

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  • A: alpha arrays
  • X: LEM/SAP HeH motif-like
  • H: LEM/SAP HeH motif
  • T: LEM/SAP HeH motif
  • F: Rho_N
UID: 000048766
Type: Automatic domain
Parent: e1a62A2
Range: D:1-47
PDB: 1xpo
PDB Description: Rho transcription termination factor
UniProt: P0AG30
Species: Escherichia coli

Structure of domain e1xpoD2

Domains in the same chain:

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e1xpoD2 D:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpoD1 D:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpoD3 D:130-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e1xpoA2 A:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpoA1 A:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpoA3 A:130-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xpoB2 B:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpoB1 B:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpoB3 B:130-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xpoC2 C:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpoC1 C:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpoC3 C:130-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xpoD2 D:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpoD1 D:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpoD3 D:130-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xpoE6 E:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpoE5 E:48-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpoE4 E:129-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e1xpoF2 F:1-47 LEM/SAP HeH motif-like LEM/SAP HeH motif LEM/SAP HeH motif
e1xpoF1 F:48-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e1xpoF3 F:130-417 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e1xpoD2 of H-group "LEM/SAP HeH motif":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1xpoC1 D:x,y,z->C:X,Y,Z Nucleic acid-binding proteins Interaction Interface Pymol
e1xpoC3 D:x,y,z->C:X,Y,Z P-loop domains-related Interaction Interface Pymol
e1xpoF1 D:X,Y-1,Z->F:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol
e1xpoE5 D:-X+1/2,Y-1/2,-Z->E:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol