ECOD: domain e1xzpA1

Domain ID e1xzpA1

A: alpha bundles
X: Four-helical up-and-down bundle
H: TrmE connector domain
T: TrmE connector domain
F: MnmE_helical

UID:	000003764
Type:	Manual and representative domain
Range:	A:118-211,A:372-450
Ligands:	SO4
PDB:	1xzp
PDB Description:	Probable tRNA modification GTPase trmE
UniProt:	Q9WYA4
Species:	Thermotoga maritima

Domains in the same chain:

Download Pymol

e1xzpA2	A:1-117	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e1xzpA1	A:118-211,A:372-450	Four-helical up-and-down bundle	TrmE connector domain	TrmE connector domain
e1xzpA6	A:211-371	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e1xzpA2	A:1-117	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e1xzpA1	A:118-211,A:372-450	Four-helical up-and-down bundle	TrmE connector domain	TrmE connector domain
e1xzpA6	A:211-371	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1xzpB1	B:1-117	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain

Structural contacts of domain e1xzpA1 of H-group "TrmE connector domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1xzpB1	A:X,Y,Z->B:x,y,z	Aminomethyltransferase folate-binding domain	Interaction Interface Pymol
e1xzpA6	A:x,y,z->A:X-Y+1,X+1,Z+1/3	P-loop domains-related	Interaction Interface Pymol
e1xzpA1	A:x,y,z->A:-X+1,-Y+2,Z	TrmE connector domain	Interaction Interface Pymol
e1xzpA1	A:-X+1,-Y+2,Z->A:x,y,z	TrmE connector domain	Interaction Interface Pymol