ECOD: domain e1xzpA6

Domain ID e1xzpA6

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: MMR_HSR1

UID:	001167744
Type:	Automatic domain
Parent:	e2gj8A1
Range:	A:211-371
Ligands:	SO4
PDB:	1xzp
PDB Description:	Probable tRNA modification GTPase trmE
UniProt:	Q9WYA4
Hsap BLAST neighbor:	Q969Y2
Species:	Thermotoga maritima

Domain
In chain context
In PDB context

Structure of domain e1xzpA6

Domains in the same chain:

Download Pymol

e1xzpA2	A:1-117	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e1xzpA1	A:118-211,A:372-450	Four-helical up-and-down bundle	TrmE connector domain	TrmE connector domain
e1xzpA6	A:211-371	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e1xzpA2	A:1-117	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain
e1xzpA1	A:118-211,A:372-450	Four-helical up-and-down bundle	TrmE connector domain	TrmE connector domain
e1xzpA6	A:211-371	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e1xzpB1	B:1-117	Alpha-beta plaits	Aminomethyltransferase folate-binding domain	Aminomethyltransferase folate-binding domain

Structural contacts of domain e1xzpA6 of H-group "P-loop domains-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1xzpB1	A:X,Y,Z->B:x,y,z	Aminomethyltransferase folate-binding domain	Interaction Interface Pymol
e1xzpA1	A:X-Y+1,X+1,Z+1/3->A:x,y,z	TrmE connector domain	Interaction Interface Pymol
e1xzpB1	A:-X,-Y+1,Z->B:x,y,z	Aminomethyltransferase folate-binding domain	Interaction Interface Pymol