Domain ID e1yarA1

Download files:
  • A: a+b four layers
  • X: Ntn/PP2C
  • H: Ntn
  • T: Proteasome subunits
  • F: Proteasome,Proteasome_A_N
UID: 000007821
Type: Manual and representative domain
Range: A:13-233
Ligands: SO4
PDB: 1yar
PDB Description: Proteasome alpha subunit
UniProt: P25156
Hsap BLAST neighbor: P28066
Species: Thermoplasma acidophilum

Structure of domain e1yarA1

Domains in the same chain:

e1yarA1 A:13-233 Ntn/PP2C Ntn Proteasome subunits

Domains in the same PDB:

e1yarA1 A:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarB1 B:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarC1 C:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarD1 D:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarE1 E:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarF1 F:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarG1 G:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarH1 H:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarI1 I:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarJ1 J:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarK1 K:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarL1 L:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarM1 M:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarN1 N:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarO1 O:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarP1 P:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarQ1 Q:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarR1 R:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarS1 S:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarT1 T:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarU1 U:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)

Structural contacts of domain e1yarA1 of H-group "Ntn":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yarB1 A:X,Y,Z->B:x,y,z Ntn Interaction Interface Pymol
e1yarG1 A:X,Y,Z->G:x,y,z Ntn Interaction Interface Pymol
e1yarN1 A:X,Y,Z->N:x,y,z Ntn Interaction Interface Pymol
e1yarH1 A:X,Y,Z->H:x,y,z Ntn Interaction Interface Pymol
e1yarR1 A:X,Y,Z->R:x,y,z Proteasome activator reg(alpha) Interaction Interface Pymol
e1yarQ1 A:X,Y,Z->Q:x,y,z Proteasome activator reg(alpha) Interaction Interface Pymol
e1yarU1 A:-X+1/2,Y-1/2,-Z->U:x,y,z Proteasome activator reg(alpha) Interaction Interface Pymol
e1yarS1 A:X,Y,Z->S:x,y,z Proteasome activator reg(alpha) Interaction Interface Pymol