Domain ID e1yarM1

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  • A: a+b four layers
  • X: Ntn/PP2C
  • H: Ntn
  • T: Proteasome subunits
  • F: Proteasome
UID: 000086847
Type: Automatic domain
Parent: e1yarH1
Range: M:1-203
Ligands: GOL SO4
PDB: 1yar
PDB Description: Proteasome beta subunit
UniProt: P28061
Hsap BLAST neighbor: P28074
Species: Thermoplasma acidophilum

Structure of domain e1yarM1

Domains in the same chain:

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e1yarM1 M:1-203 Ntn/PP2C Ntn Proteasome subunits

Domains in the same PDB:

e1yarA1 A:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarB1 B:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarC1 C:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarD1 D:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarE1 E:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarF1 F:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarG1 G:13-233 Ntn/PP2C Ntn Proteasome subunits
e1yarH1 H:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarI1 I:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarJ1 J:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarK1 K:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarL1 L:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarM1 M:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarN1 N:1-203 Ntn/PP2C Ntn Proteasome subunits
e1yarO1 O:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarP1 P:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarQ1 Q:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarR1 R:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarS1 S:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarT1 T:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)
e1yarU1 U:4-231 Four-helical up-and-down bundle Proteasome activator reg(alpha) Proteasome activator reg(alpha)

Structural contacts of domain e1yarM1 of H-group "Ntn":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1yarN1 M:X,Y,Z->N:x,y,z Ntn Interaction Interface Pymol
e1yarL1 M:x,y,z->L:X,Y,Z Ntn Interaction Interface Pymol
e1yarN1 M:-X+1,Y,-Z+1->N:x,y,z Ntn Interaction Interface Pymol
e1yarH1 M:x,y,z->H:-X+1,Y,-Z+1 Ntn Interaction Interface Pymol
e1yarG1 M:x,y,z->G:X,Y,Z Ntn Interaction Interface Pymol
e1yarF1 M:x,y,z->F:X,Y,Z Ntn Interaction Interface Pymol
e1yarE1 M:-X+1/2,Y-1/2,-Z+1->E:x,y,z Ntn Interaction Interface Pymol
e1yarF1 M:-X+1/2,Y-1/2,-Z+1->F:x,y,z Ntn Interaction Interface Pymol