ECOD: domain e1ybaB1

Domain ID e1ybaB1

A: a+b two layers
X: Alpha-beta plaits
H: ACT-like
T: ACT-like
F: AHAS-like_ACT

UID:	000064820
Type:	Automatic domain
Parent:	e1sc6A1
Range:	B:327-410
PDB:	1yba
PDB Description:	D-3-phosphoglycerate dehydrogenase
UniProt:	P0A9T0
Species:	Escherichia coli

Domain
In chain context
In PDB context

Structure of domain e1ybaB1

Domains in the same chain:

Download Pymol

e1ybaB3	B:7-107,B:296-326	Rossmann-like	Rossmann-related	Formate/glycerate dehydrogenase catalytic domain-like
e1ybaB2	B:108-295	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1ybaB1	B:327-410	Alpha-beta plaits	ACT-like	ACT-like

Domains in the same PDB:

e1ybaA3	A:7-107,A:296-326	Rossmann-like	Rossmann-related	Formate/glycerate dehydrogenase catalytic domain-like
e1ybaA2	A:108-295	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1ybaA1	A:327-410	Alpha-beta plaits	ACT-like	ACT-like
e1ybaB3	B:7-107,B:296-326	Rossmann-like	Rossmann-related	Formate/glycerate dehydrogenase catalytic domain-like
e1ybaB2	B:108-295	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1ybaB1	B:327-410	Alpha-beta plaits	ACT-like	ACT-like
e1ybaC3	C:7-107,C:296-326	Rossmann-like	Rossmann-related	Formate/glycerate dehydrogenase catalytic domain-like
e1ybaC2	C:108-295	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1ybaC1	C:327-410	Alpha-beta plaits	ACT-like	ACT-like
e1ybaD3	D:7-107,D:296-326	Rossmann-like	Rossmann-related	Formate/glycerate dehydrogenase catalytic domain-like
e1ybaD2	D:108-295	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e1ybaD1	D:327-410	Alpha-beta plaits	ACT-like	ACT-like

Structural contacts of domain e1ybaB1 of H-group "ACT-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e1ybaC1	B:X,Y,Z->C:x,y,z	ACT-like	Interaction Interface Pymol
e1ybaA2	B:-Y,X,Z-1/4->A:x,y,z	Rossmann-related	Interaction Interface Pymol
e1ybaA1	B:-Y,X-1,Z-1/4->A:x,y,z	ACT-like	Interaction Interface Pymol
e1ybaA3	B:-Y,X-1,Z-1/4->A:x,y,z	Rossmann-related	Interaction Interface Pymol